Volume 10; Issue 12 Supplem

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BMC Bioinformatics
Volume 10; Issue 12 Supplem

BMC Bioinformatics

Volume 10; Issue 12 Supplem

1

Trends in modeling Biomedical Complex Systems

Luciano Milanesi, Paolo Romano, Gastone Castellani, Daniel Remondini, Pietro Liò

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 365 KB

english, 2009

2

Data recovery and integration from public databases uncovers transformation-specific transcriptional downregulation of cAMP-PKA pathway-encoding genes

Chiara Balestrieri, Lilia Alberghina, Marco Vanoni, Ferdinando Chiaradonna

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 3.48 MB

english, 2009

3

Survival Online: a web-based service for the analysis of correlations between gene expression and clinical and follow-up data

Luca Corradi, Valentina Mirisola, Ivan Porro, Livia Torterolo, Marco Fato, Paolo Romano, Ulrich Pfeffer

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2009

4

A Perl procedure for protein identification by Peptide Mass Fingerprinting

Alessandra Tiengo, Nicola Barbarini, Sonia Troiani, Luisa Rusconi, Paolo Magni

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 501 KB

english, 2009

5

Analysis and modelling of motility of cell populations with MotoCell

Concita Cantarella, Leandra Sepe, Francesca Fioretti, Maria Carla Ferrari, Giovanni Paolella

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 2.26 MB

english, 2009

6

Conditional independence relations among biological markers may improve clinical decision as in the case of triple negative breast cancers

Federico M Stefanini, Danila Coradini, Elia Biganzoli

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 659 KB

english, 2009

7

A computational framework for qualitative simulation of nonlinear dynamical models of gene-regulatory networks

Liliana Ironi, Luigi Panzeri

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 898 KB

english, 2009

8

Extraction, integration and analysis of alternative splicing and protein structure distributed information

Matteo D'Antonio, Marco Masseroli

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 802 KB

english, 2009

9

Towards a systems biology approach to mammalian cell cycle: modeling the entrance into S phase of quiescent fibroblasts after serum stimulation

Roberta Alfieri, Matteo Barberis, Ferdinando Chiaradonna, Daniela Gaglio, Luciano Milanesi, Marco Vanoni, Edda Klipp, Lilia Alberghina

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 1.01 MB

english, 2009

10

Protopia: a protein-protein interaction tool

Alejandro Real-Chicharro, Iván Ruiz-Mostazo, Ismael Navas-Delgado, Amine Kerzazi, Othmane Chniber, Francisca Sánchez-Jiménez, Miguel Ángel Medina, José F Aldana-Montes

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 1.15 MB

english, 2009

11

The Human EST Ontology Explorer: a tissue-oriented visualization system for ontologies distribution in human EST collections

Ivan Merelli, Andrea Caprera, Alessandra Stella, Marcello Del Corvo, Luciano Milanesi, Barbara Lazzari

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 559 KB

english, 2009

12

In silico saturation mutagenesis and docking screening for the analysis of protein-ligand interaction: the Endothelial Protein C Receptor case study

Federica Chiappori, Pasqualina D'Ursi, Ivan Merelli, Luciano Milanesi, Ermanna Rovida

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 529 KB

english, 2009

13

Developing optimal input design strategies in cancer systems biology with applications to microfluidic device engineering

Filippo Menolascina, Domenico Bellomo, Thomas Maiwald, Vitoantonio Bevilacqua, Caterina Ciminelli, Angelo Paradiso, Stefania Tommasi

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 736 KB

english, 2009

14

Phenotypic and genotypic data integration and exploration through a web-service architecture

Angelo Nuzzo, Alberto Riva, Riccardo Bellazzi

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 655 KB

english, 2009

15

Clinical bioinformatics for complex disorders: a schizophrenia case study

Emanuel Schwarz, F Markus Leweke, Sabine Bahn, Pietro Liò

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 817 KB

english, 2009

16

XML-based approaches for the integration of heterogeneous bio-molecular data

Marco Mesiti, Ernesto Jiménez-Ruiz, Ismael Sanz, Rafael Berlanga-Llavori, Paolo Perlasca, Giorgio Valentini, David Manset

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 1.15 MB

english, 2009

17

Identification of functionally related genes using data mining and data integration: a breast cancer case study

Ettore Mosca, Gloria Bertoli, Eleonora Piscitelli, Laura Vilardo, Rolland A Reinbold, Ileana Zucchi, Luciano Milanesi

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 446 KB

english, 2009

18

A scale space approach for unsupervised feature selection in mass spectra classification for ovarian cancer detection

Michele Ceccarelli, Antonio d'Acierno, Angelo Facchiano

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 573 KB

english, 2009